
Starting a business is exciting, but managing finances can quickly become overwhelming. Choosing the right accounting software is crucial for tracking expenses, managing invoices, and ensuring compliance with tax regulations. In this guide, we’ll break down the best accounting software options for startups in the USA, helping you find the perfect fit for your business.
If you're launching a new venture, you might also find essential tools you need to start a successful business helpful. For those exploring different business opportunities, check out the best businesses to start for inspiration. If your startup relies on digital marketing, understanding how to create an SEO content strategy can help you build online visibility.
What to Look for in Accounting Software
Before diving into the top options, consider these key features when choosing accounting software:
Ease of Use – A user-friendly interface saves time and minimizes errors.
Scalability – Your software should grow with your business.
Integrations – Compatibility with other business tools like payroll, CRM, and payment processors.
Automation – Features like recurring invoices and tax calculations simplify accounting tasks.
Affordability – Pricing should fit your startup’s budget.
Compliance – Ensure the software supports U.S. tax laws and IRS reporting requirements.
Best Accounting Software for Startups
1. QuickBooks Online – Best Overall

Pricing: Starts at $30/month (Simple Start), $60/month (Essentials), $90/month (Plus), and $200/month (Advanced).
QuickBooks Online is the most popular accounting software for startups, offering robust features, automation, and scalability. It integrates with hundreds of business apps, making it a great all-in-one financial management solution. It’s highly recommended by PCMag as the best choice for small businesses due to its intuitive dashboard and extensive feature set.
Pros:
✔ Highly customizable invoices and automatic payment reminders
✔ Comprehensive payroll and tax support
✔ Mobile app for on-the-go management
✔ Extensive third-party integrations, including Shopify and PayPal
✔ Smart reporting and AI-driven insights
Cons:
✖ Higher pricing compared to some competitors
✖ Learning curve for advanced features
✖ Limited users on lower-tier plans
2. FreshBooks – Best for Service-Based Startups

Price: Starts at $19/month (Lite), $33/month (Plus), $60/month (Premium). Custom pricing available for larger businesses.
FreshBooks is ideal for freelancers and service-based businesses that need simple invoicing, time tracking, and expense management. It offers a clean interface and excellent customer support.
Pros:
✔ User-friendly interface with an intuitive dashboard
✔ Strong invoicing features, ideal for freelancers and service businesses
✔ Time tracking and project management included
✔ Good customer support
Cons:
✖ Lacks inventory management
✖ Limited number of users in lower-tier plans
✖ Not as scalable for larger businesses
Pro Tip:Set up automatic late payment reminders to improve cash flow and avoid chasing invoices.
3. Xero – Best for Growing Startups

Price: Starts at $15/month (Early), $42/month (Growing), $78/month (Established).
Xero is an excellent choice for startups planning to scale. It provides robust financial reporting, bank reconciliation, and inventory management.
Pros:
✔ Unlimited users, even on the lowest plan
✔ Excellent financial reporting and bank reconciliation tools
✔ Strong automation for transaction categorization
✔ Built-in payroll integration with Gusto
Cons:
✖ Customer support is email-only, no live phone support
✖ Steeper learning curve compared to Wave or FreshBooks
✖ No direct integration with QuickBooks tools
Pro Tip:Use Xero’s AI-powered cash flow forecasting to predict revenue trends and adjust expenses accordingly.
4. Wave – Best Free Option

Price: Free for accounting, invoicing, and banking. Paid add-ons: Payroll ($20–$40/month), Payments (2.9% + 60¢ per credit card transaction).
If you’re on a tight budget, Wave offers a completely free accounting solution for startups. It’s perfect for small businesses that need basic bookkeeping, invoicing, and expense tracking.
Pros:
✔ Completely free for accounting and invoicing
✔ No transaction or user limits
✔ Easy to use, beginner-friendly
✔ Good mobile app
Cons:
✖ Limited integrations compared to QuickBooks or Xero
✖ No advanced reporting tools
✖ Payroll is not free and only available in select states
Pro Tip: Utilize Wave’s free receipt scanning feature to organize expense tracking effortlessly.
5. Zoho Books – Best for Automation & Integrations

Price: Starts at $15/month (Basic), $30/month (Standard), $60/month (Professional), $120/month (Premium). Free for businesses under $50K annual revenue.
Zoho Books is ideal for tech-savvy startups looking for automation. It integrates seamlessly with other Zoho products, making it a great choice if you already use Zoho CRM or Zoho Inventory.
Pros:
✔ Strong automation tools for invoicing and workflows
✔ Affordable pricing compared to QuickBooks and Xero
✔ Seamless integration with Zoho’s ecosystem (CRM, Inventory, etc.)
✔ Multi-currency and multi-language support
Cons:
✖ Limited payroll options in the U.S.
✖ Not as widely used as QuickBooks, meaning fewer third-party integrations
✖ More suitable for tech-savvy users due to automation features
Pro Tip:Leverage Zoho Books’ automation tools to send reminders, approve invoices, and reconcile payments without manual work.
6. Bench – Best for Outsourced Bookkeeping

Pricing: Starts at $299/month
Bench is a great option if you want a hands-off approach to bookkeeping. It provides a team of professional bookkeepers to manage your finances while you focus on growing your business.
Pros:
✔ Dedicated bookkeeping team to handle finances for you
✔ Monthly financial reports and tax-ready statements
✔ Seamless integration with major business banks
✔ Saves time by automating bookkeeping tasks
✔ Ideal for businesses that want a hands-off approach
Cons:
✖ Expensive compared to DIY accounting software
✖ No invoicing or bill payment features
✖ Not ideal for startups that prefer full financial control
✖ Limited third-party integrations compared to QuickBooks or Xero
Pro Tip:Use Bench’s financial insights to better understand your cash flow and profitability, and consider upgrading to Premium if you need tax filing services included.
Which Accounting Software is Right for You?
If you want the best all-in-one solution, go with QuickBooks Online.
If you’re a service-based business, FreshBooks is a great fit.
If you need scalability and multi-user support, choose Xero.
If you’re looking for a free option, Wave is unbeatable.
If automation is key, Zoho Books is a top choice.
If you prefer outsourced bookkeeping, Bench is the best solution.
Final Thoughts
The right accounting software can save your startup time, money, and headaches. By choosing a solution that fits your business needs, you can stay organized, remain compliant, and focus on growth.
For more startup resources, check out the U.S. Small Business Administration and the IRS Small Business Tax Guide.